STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO00424.1MFS superfamily di tripeptide transporter. (491 aa)    
Predicted Functional Partners:
KRN98832.1
Aminopeptidase N.
  
 
 0.642
KRN96322.1
Dipeptidase PepV.
      
 0.617
KRN99239.1
Acetyltransferase.
   
  
 0.612
KRN98478.1
Neutral endopeptidase.
 
  
 0.595
KRO00199.1
Hypothetical protein.
   
  
 0.594
KRN98898.1
Hypothetical protein.
   
    0.583
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.583
KRN97949.1
Methyl-accepting chemotaxis-like protein.
   
    0.582
KRO00115.1
Dihydrofolate reductase.
   
    0.582
KRO00767.1
Hypothetical protein.
   
    0.578
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.