STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97909.1Diguanylate cyclase phosphodiesterase domain-containing protein. (400 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.912
KRO00096.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 0.866
KRN97907.1
Diguanylate cyclase phosphodiesterase domain 2 containing protein.
 
 
 0.833
KRN98962.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 
 0.779
KRO00358.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 
 0.768
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.625
KRN98284.1
Hypothetical protein.
  
     0.548
KRN98456.1
Hypothetical protein.
  
   
 0.546
KRO00412.1
Transcriptional regulator.
  
     0.504
KRO00356.1
Glycosyltransferase.
 
 
 0.495
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.