STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97686.1Beta-lactamase class C related penicillin binding protein. (322 aa)    
Predicted Functional Partners:
KRN98784.1
Beta-hexosamidase a, glycoside hydrolase family 3.
 
 0.973
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.926
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.756
murQ-2
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.726
KRN99023.1
Glycoside hydrolase family 3 domain protein.
  
 
 0.714
KRN97688.1
Multidrug resistance ABC superfamily ATP binding cassette transporter, ABC membrane protein.
     
 0.617
KRN98977.1
D-alanyl-D-alanine carboxypeptidase precursor; Belongs to the peptidase S11 family.
    
 0.605
KRN97687.1
multiABC transporter.
     
 0.602
KRN99847.1
Hypothetical protein.
  
 
 0.562
KRO00444.1
Multidrug transport protein.
 
   
 0.514
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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