STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO00036.1ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
KRO00037.1
Peptide ABC transporter permease transmembrane protein.
 0.998
KRO00045.1
Permease.
 0.992
KRN99607.1
Permease.
 
 0.939
KRN99899.1
ABC transporter ATP-binding protein.
     
0.900
KRO00005.1
Oligopeptide ABC transporter, membrane-spanning subunit.
 
 
    0.893
KRN98480.1
Antimicrobial peptide ABC transporter permease.
 
 0.879
KRN94725.1
ABC transporter.
 
0.870
KRO00790.1
Hypothetical protein.
  
 0.864
KRO00343.1
ABC transporter permease.
  
 0.864
KRO00043.1
ABC transporter ATP-binding protein.
  
 
 0.844
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.