STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO00092.1Integral membrane protein. (508 aa)    
Predicted Functional Partners:
KRO00091.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.953
KRO00089.1
Exosortase.
 
    0.934
KRO00090.1
Glycosyltransferase.
 
  
 0.931
KRN99206.1
Hypothetical protein.
 
  
 0.546
KRO00088.1
Hypothetical protein.
       0.545
KRO00864.1
Hypothetical protein.
  
     0.491
KRO00093.1
Formate nitrite transporter family protein.
       0.484
KRN98962.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
     0.462
KRO00433.1
Glycosyltransferase.
  
 
 0.442
KRN99720.1
Family 2 glycosyl transferase.
  
 
 0.442
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.