STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN99613.1Competence protein. (292 aa)    
Predicted Functional Partners:
KRO00256.1
Septation ring formation regulator EzrA.
  
     0.741
mecA
Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
 
     0.696
KRO00204.1
Type II secretion competence system, protein ComEC-like.
 
  
 0.656
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.651
KRO00205.1
Competence protein CelA.
   
  
 0.647
KRN99631.1
CinA domain-containing protein; Belongs to the CinA family.
      
 0.637
KRN98355.1
tPR repeats containing protein.
  
     0.625
KRN99755.1
Hypothetical protein.
  
     0.618
KRN98246.1
Hypothetical protein.
   
  
 0.595
KRN99201.1
CAAX family protease.
  
     0.568
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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