W5NPJ6_SHEEP protein (Ovis aries) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W5NPJ6_SHEEP

Uncharacterized protein. (93 aa)

Predicted Functional Partners:

RUVBL1

0.602

ACTR5

0.570

RUVBL2

0.494

INO80C

0.492

CEACAM19

0.477

TEX101

0.434

W5PLC4_SHEEP

0.414

TMEM217

0.406

TSGA13

0.401

LOC105605944

0.400

Your Current Organism:

Ovis aries

NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTR5	INO80C	ENSOARP00000000204	ENSOARP00000006090	Actin related protein 5; Belongs to the actin family.	INO80 complex subunit C.	0.998
ACTR5	RUVBL1	ENSOARP00000000204	ENSOARP00000005333	Actin related protein 5; Belongs to the actin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.998
ACTR5	RUVBL2	ENSOARP00000000204	ENSOARP00000013476	Actin related protein 5; Belongs to the actin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.983
ACTR5	W5NPJ6_SHEEP	ENSOARP00000000204	ENSOARP00000000086	Actin related protein 5; Belongs to the actin family.	Uncharacterized protein.	0.570
CEACAM19	W5NPJ6_SHEEP	ENSOARP00000009858	ENSOARP00000000086	Carcinoembryonic antigen related cell adhesion molecule 19.	Uncharacterized protein.	0.477
INO80C	ACTR5	ENSOARP00000006090	ENSOARP00000000204	INO80 complex subunit C.	Actin related protein 5; Belongs to the actin family.	0.998
INO80C	RUVBL1	ENSOARP00000006090	ENSOARP00000005333	INO80 complex subunit C.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.997
INO80C	RUVBL2	ENSOARP00000006090	ENSOARP00000013476	INO80 complex subunit C.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.980
INO80C	W5NPJ6_SHEEP	ENSOARP00000006090	ENSOARP00000000086	INO80 complex subunit C.	Uncharacterized protein.	0.492
LOC105605944	W5NPJ6_SHEEP	ENSOARP00000002079	ENSOARP00000000086	Ig-like domain-containing protein.	Uncharacterized protein.	0.400
RUVBL1	ACTR5	ENSOARP00000005333	ENSOARP00000000204	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Actin related protein 5; Belongs to the actin family.	0.998
RUVBL1	INO80C	ENSOARP00000005333	ENSOARP00000006090	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	INO80 complex subunit C.	0.997
RUVBL1	RUVBL2	ENSOARP00000005333	ENSOARP00000013476	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.999
RUVBL1	W5NPJ6_SHEEP	ENSOARP00000005333	ENSOARP00000000086	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Uncharacterized protein.	0.602
RUVBL2	ACTR5	ENSOARP00000013476	ENSOARP00000000204	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Actin related protein 5; Belongs to the actin family.	0.983
RUVBL2	INO80C	ENSOARP00000013476	ENSOARP00000006090	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	INO80 complex subunit C.	0.980
RUVBL2	RUVBL1	ENSOARP00000013476	ENSOARP00000005333	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.999
RUVBL2	W5NPJ6_SHEEP	ENSOARP00000013476	ENSOARP00000000086	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Uncharacterized protein.	0.494
TEX101	TSGA13	ENSOARP00000009172	ENSOARP00000006285	UPAR/Ly6 domain-containing protein.	Testis specific 13.	0.457
TEX101	W5NPJ6_SHEEP	ENSOARP00000009172	ENSOARP00000000086	UPAR/Ly6 domain-containing protein.	Uncharacterized protein.	0.434