STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
    
 0.903
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
 0.867
BANF2
Barrier to autointegration factor 2.
    
 0.839
PNPLA5
Patatin like phospholipase domain containing 5.
   
  
 0.831
LTV1
LTV1 ribosome biogenesis factor.
    
 0.770
BYSL
Bystin like.
    
 0.709
SPHKAP
SPHK1 interactor, AKAP domain containing.
   
  
 0.695
RIOK2
RIO kinase 2.
    
 0.681
TADA3
Transcriptional adaptor 3.
      
 0.656
SSR4
Signal sequence receptor subunit 4.
      
 0.656
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.