SMG7 protein (Ovis aries) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SMG7

SMG7 nonsense mediated mRNA decay factor. (1170 aa)

Predicted Functional Partners:

UPF1

0.996

SMG1

0.995

UPF3A

0.984

SMG5

0.966

SMG6

0.965

RBM8A

0.960

PABPC1

0.934

W5PQU7_SHEEP

0.927

W5Q3F1_SHEEP

0.894

UPF2

0.886

Your Current Organism:

Ovis aries

NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PABPC1	RBM8A	ENSOARP00000000076	ENSOARP00000022175	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.624
PABPC1	SMG1	ENSOARP00000000076	ENSOARP00000011735	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.738
PABPC1	SMG5	ENSOARP00000000076	ENSOARP00000006202	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	SMG5 nonsense mediated mRNA decay factor.	0.848
PABPC1	SMG6	ENSOARP00000000076	ENSOARP00000016185	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	SMG6 nonsense mediated mRNA decay factor.	0.928
PABPC1	SMG7	ENSOARP00000000076	ENSOARP00000001417	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	SMG7 nonsense mediated mRNA decay factor.	0.934
PABPC1	UPF1	ENSOARP00000000076	ENSOARP00000011525	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	UPF1 RNA helicase and ATPase.	0.971
PABPC1	UPF2	ENSOARP00000000076	ENSOARP00000015653	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	UPF2 regulator of nonsense mediated mRNA decay.	0.660
PABPC1	UPF3A	ENSOARP00000000076	ENSOARP00000009669	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	UPF3A regulator of nonsense mediated mRNA decay.	0.450
PABPC1	W5PQU7_SHEEP	ENSOARP00000000076	ENSOARP00000012825	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	Uncharacterized protein.	0.829
PABPC1	W5Q3F1_SHEEP	ENSOARP00000000076	ENSOARP00000017240	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	Smg4_UPF3 domain-containing protein.	0.592
RBM8A	PABPC1	ENSOARP00000022175	ENSOARP00000000076	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.624
RBM8A	SMG1	ENSOARP00000022175	ENSOARP00000011735	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.979
RBM8A	SMG5	ENSOARP00000022175	ENSOARP00000006202	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG5 nonsense mediated mRNA decay factor.	0.662
RBM8A	SMG6	ENSOARP00000022175	ENSOARP00000016185	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG6 nonsense mediated mRNA decay factor.	0.915
RBM8A	SMG7	ENSOARP00000022175	ENSOARP00000001417	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG7 nonsense mediated mRNA decay factor.	0.960
RBM8A	UPF1	ENSOARP00000022175	ENSOARP00000011525	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	UPF1 RNA helicase and ATPase.	0.991
RBM8A	UPF2	ENSOARP00000022175	ENSOARP00000015653	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	UPF2 regulator of nonsense mediated mRNA decay.	0.993
RBM8A	UPF3A	ENSOARP00000022175	ENSOARP00000009669	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	UPF3A regulator of nonsense mediated mRNA decay.	0.930
RBM8A	W5PQU7_SHEEP	ENSOARP00000022175	ENSOARP00000012825	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein.	0.662
RBM8A	W5Q3F1_SHEEP	ENSOARP00000022175	ENSOARP00000017240	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Smg4_UPF3 domain-containing protein.	0.913