Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL28Ribosomal protein L28. (137 aa)    
Predicted Functional Partners:
W5NQ87_SHEEP
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
RPL27A
Ribosomal protein L27a.
   
 0.999
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.999
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
W5P7Z1_SHEEP
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
RPS19
Ribosomal protein S19.
   
 
 0.999
RPS18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.999
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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