STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM38Tripartite motif containing 38. (460 aa)    
Predicted Functional Partners:
W5PNA3_SHEEP
Uncharacterized protein.
   
 0.835
ZCCHC3
Zinc finger CCHC-type containing 3.
   
 
 0.706
TRIM56
Tripartite motif containing 56.
   
 
 0.619
IL5RA
Interleukin 5 receptor subunit alpha.
   
  
 0.611
TNFRSF1B
TNF receptor superfamily member 1B.
   
 
 0.597
USP3
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.584
ZNF182
Zinc finger protein 182.
   
 0.546
DDX41
DEAD-box helicase 41.
    
 0.540
MCOLN2
Mucolipin 2.
    
 
 0.538
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.519
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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