STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NU49_SHEEPGTP_EFTU_D3 domain-containing protein. (297 aa)    
Predicted Functional Partners:
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.955
VARS
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.687
W5PRD9_SHEEP
Anticodon_1 domain-containing protein.
   
 0.687
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.684
MARS1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.658
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.632
RPS20
Ribosomal_S10 domain-containing protein.
  
 0.599
W5P882_SHEEP
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.588
W5Q5L5_SHEEP
EF1_GNE domain-containing protein.
   
 0.588
EEF1B2
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.588
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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