STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNC1Potassium voltage-gated channel subfamily C member 1; Belongs to the potassium channel family. (585 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.878
KCNIP1
Potassium voltage-gated channel interacting protein 1.
   
 0.818
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.748
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.742
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.693
RPL32
Ribosomal protein L32.
   
 0.685
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.633
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
 0.626
RPS19
Ribosomal protein S19.
   
 
 0.616
RPL28
Ribosomal protein L28.
   
 0.615
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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