Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein domain family member 7. (582 aa)    
Predicted Functional Partners:
MEPCE
Methylphosphate capping enzyme.
   
 
 0.995
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.990
CDK9
Cyclin dependent kinase 9.
   
 0.988
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.985
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.973
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.940
ZC3H8
Zinc finger CCCH-type containing 8.
   
 
 0.936
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 0.907
SPINDOC
Spindlin interactor and repressor of chromatin binding.
      
 0.901
SSB
Small RNA binding exonuclease protection factor La.
   
 
0.877
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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