STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATHL2Cathelicidin-2; Binds to the lipid A moiety of bacterial lipipolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. Potent antimicrobial activity (By similarity); Belongs to the cathelicidin family. (186 aa)    
Predicted Functional Partners:
LOC101112427
CAP18_C domain-containing protein.
  
 
0.992
CATHL3
Cathelicidin-3; Exerts, in vitro, a potent antimicrobial activity. Probably due to an impairment of the function of the respiratory chain and of energy-dependent activities in the inner membrane of susceptible microorganisms (By similarity); Belongs to the cathelicidin family.
  
 
0.955
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.911
RELA
RELA proto-oncogene, NF-kB subunit.
   
 
 0.903
PGBD1
PiggyBac transposable element derived 1.
      
 0.750
SC52_SHEEP
Cathelin-related peptide SC5; Broad spectrum bactericidal agent.
  
 
0.700
W5P1Y8_SHEEP
Uncharacterized protein.
   
 
 
0.680
OVCH2
Ovochymase 2 (gene/pseudogene); Belongs to the peptidase S1 family.
     
 0.628
DEFB125
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.608
W5NR98_SHEEP
Histone H2B; Belongs to the histone H2B family.
      
 0.589
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
Server load: low (14%) [HD]