STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP9XUbiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. (2570 aa)    
Predicted Functional Partners:
SMAD4
Mothers against decapentaplegic homolog.
   
 0.950
USP13
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.851
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.799
MCL1
MCL1 apoptosis regulator, BCL2 family member.
    
 
 0.783
IQCB1
IQ motif containing B1.
    
 
 0.775
ITCH
E3 ubiquitin-protein ligase.
   
 0.749
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.745
OTUD4
OTU deubiquitinase 4.
   
 
 0.744
OTUD3
OTU deubiquitinase 3.
      
 0.726
ATXN10
Ataxin 10.
    
 
 0.720
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.