STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC28Tetratricopeptide repeat domain 28. (2290 aa)    
Predicted Functional Partners:
IAH1
Isoamyl acetate hydrolyzing esterase 1 (putative).
   
  
 0.931
F13B
Coagulation factor XIII B chain.
    
 
 0.887
ATAD2
ATPase family AAA domain containing 2.
    
 0.843
NLE1
Notchless homolog 1.
   
  
 0.812
STK40
Serine/threonine kinase 40.
    
 
 0.801
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
    
 0.793
EHBP1
EH domain binding protein 1.
      
 0.778
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.776
TNPO3
Transportin 3.
   
  
 0.772
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 0.768
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.