STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTF1AUncharacterized protein. (85 aa)    
Predicted Functional Partners:
FOXN4
Forkhead box N4.
   
 
 0.960
BARHL2
BarH like homeobox 2.
   
  
 0.876
CPA1
Carboxypeptidase A1.
   
  
 0.874
ISL1
ISL LIM homeobox 1.
   
 0.841
SOX9
SRY-box transcription factor 9.
    
 
 0.805
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.793
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.790
ATOH1
Atonal bHLH transcription factor 1.
   
 
 0.775
PDX1
Homeobox domain-containing protein.
   
 
 0.737
W5P0G0_SHEEP
Uncharacterized protein.
   
  
 0.721
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.