STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (385 aa)    
Predicted Functional Partners:
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.802
METTL4
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.718
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
   
  
 0.716
PXDC1
PX domain containing 1.
      
 0.685
FTO
FTO_NTD domain-containing protein.
     
 0.676
DCP1B
Decapping mRNA 1B.
      
 0.665
SLIRP
SRA stem-loop-interacting RNA-binding protein.
      
 0.663
LRRC3
Leucine rich repeat containing 3.
      
 0.642
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.641
ADCK1
AarF domain containing kinase 1.
      
 0.636
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.