STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLIRPSRA stem-loop-interacting RNA-binding protein. (111 aa)    
Predicted Functional Partners:
LRPPRC
PPR_long domain-containing protein.
   
 
 0.849
ADCK1
AarF domain containing kinase 1.
   
  
 0.691
LRRC3
Leucine rich repeat containing 3.
    
 
 0.682
DCP1B
Decapping mRNA 1B.
    
 
 0.680
PXDC1
PX domain containing 1.
      
 0.678
SNW1
SNW domain containing 1.
   
 
 0.664
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.663
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
      
 0.663
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
    
 
 0.662
EXOSC10
Exosome component 10.
   
 
 0.638
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.