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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD4Myb/SANT DNA binding domain containing 4 with coiled-coils. (345 aa)    
Predicted Functional Partners:
CCDC117
Coiled-coil domain containing 117.
      
 0.810
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.775
SLC16A4
Solute carrier family 16 member 4.
    
 
 0.688
HSPA13
Heat shock protein family A (Hsp70) member 13.
    
 
 0.638
CNTNAP5
Contactin associated protein like 5.
      
 0.634
RHOQ
Ras homolog family member Q.
    
 0.604
MEGF11
Multiple EGF like domains 11.
     
 0.604
PLA2G4E
Phospholipase A2.
    
 
 0.591
RCAN2
Regulator of calcineurin 2.
      
 0.589
FAM110B
FAM110_C domain-containing protein.
      
 0.588
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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