STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACFD1Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
RETREG3
Reticulophagy regulator family member 3.
      
 0.536
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.527
FAM163A
Family with sequence similarity 163 member A.
      
 0.520
RABAC1
PRA1 family protein.
   
  
 0.506
MINDY1
MINDY lysine 48 deubiquitinase 1.
      
 0.478
SMIM14
Small integral membrane protein 14.
      
 0.477
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.477
PRRG1
Proline rich and Gla domain 1.
      
 0.477
FAM118A
Family with sequence similarity 118 member A.
      
 0.477
KLHDC3
Kelch domain containing 3.
      
 0.476
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.