LYZL4 protein (Ovis aries) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LYZL4

Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family. (157 aa)

Predicted Functional Partners:

CSN2

0.719

YEATS4

0.713

LACB_SHEEP

0.588

CSN3

0.588

W5P7K3_SHEEP

0.550

SPRYD4

0.549

W5P936_SHEEP

0.536

PDZK1

0.495

AKAP1

0.480

TAX1BP1

0.480

Your Current Organism:

Ovis aries

NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP1	LYZL4	ENSOARP00000008188	ENSOARP00000003541	A-kinase anchoring protein 1.	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	0.480
CSN2	CSN3	ENSOARP00000011245	ENSOARP00000011880	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	0.993
CSN2	LACB_SHEEP	ENSOARP00000011245	ENSOARP00000005471	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	0.889
CSN2	LYZL4	ENSOARP00000011245	ENSOARP00000003541	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	0.719
CSN3	CSN2	ENSOARP00000011880	ENSOARP00000011245	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	0.993
CSN3	LACB_SHEEP	ENSOARP00000011880	ENSOARP00000005471	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	0.982
CSN3	LYZL4	ENSOARP00000011880	ENSOARP00000003541	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	0.588
LACB_SHEEP	CSN2	ENSOARP00000005471	ENSOARP00000011245	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	0.889
LACB_SHEEP	CSN3	ENSOARP00000005471	ENSOARP00000011880	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	0.982
LACB_SHEEP	LYZL4	ENSOARP00000005471	ENSOARP00000003541	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	0.588
LYZL4	AKAP1	ENSOARP00000003541	ENSOARP00000008188	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	A-kinase anchoring protein 1.	0.480
LYZL4	CSN2	ENSOARP00000003541	ENSOARP00000011245	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Beta-casein; Important role in determination of the surface properties of the casein micelles; Belongs to the beta-casein family.	0.719
LYZL4	CSN3	ENSOARP00000003541	ENSOARP00000011880	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk.	0.588
LYZL4	LACB_SHEEP	ENSOARP00000003541	ENSOARP00000005471	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Beta-lactoglobulin-1/B; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule; Belongs to the calycin superfamily. Lipocalin family.	0.588
LYZL4	PDZK1	ENSOARP00000003541	ENSOARP00000022103	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	PDZ domain containing 1.	0.495
LYZL4	SPRYD4	ENSOARP00000003541	ENSOARP00000009423	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	SPRY domain containing 4.	0.549
LYZL4	TAX1BP1	ENSOARP00000003541	ENSOARP00000009855	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Tax1 binding protein 1.	0.480
LYZL4	W5P7K3_SHEEP	ENSOARP00000003541	ENSOARP00000006407	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Cystatin domain-containing protein.	0.550
LYZL4	W5P936_SHEEP	ENSOARP00000003541	ENSOARP00000006944	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	Beta defensin OBD108.	0.536
LYZL4	YEATS4	ENSOARP00000003541	ENSOARP00000021873	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.	YEATS domain containing 4.	0.713