STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM34Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28.
   
 
 0.954
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.953
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.952
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.944
DDX56
DEAD-box helicase 56.
   
 0.928
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
   
 0.917
DDX24
DEAD-box helicase 24.
   
 0.909
WDR74
WD repeat domain 74.
   
 
 0.905
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.897
BOP1
BOP1 ribosomal biogenesis factor.
   
  
 0.892
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.