Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1orf74 | DDX1 | ENSOARP00000004603 | ENSOARP00000017583 | Chromosome 1 open reading frame 74. | DEAD-box helicase 1. | 0.730 |
C1orf74 | DHX36 | ENSOARP00000004603 | ENSOARP00000003754 | Chromosome 1 open reading frame 74. | DEAH-box helicase 36. | 0.740 |
DDX1 | C1orf74 | ENSOARP00000017583 | ENSOARP00000004603 | DEAD-box helicase 1. | Chromosome 1 open reading frame 74. | 0.730 |
DDX1 | DDX21 | ENSOARP00000017583 | ENSOARP00000005698 | DEAD-box helicase 1. | Uncharacterized protein. | 0.811 |
DDX1 | DDX41 | ENSOARP00000017583 | ENSOARP00000005977 | DEAD-box helicase 1. | DEAD-box helicase 41. | 0.408 |
DDX1 | DHX36 | ENSOARP00000017583 | ENSOARP00000003754 | DEAD-box helicase 1. | DEAH-box helicase 36. | 0.979 |
DDX1 | DHX9 | ENSOARP00000017583 | ENSOARP00000020502 | DEAD-box helicase 1. | DExH-box helicase 9. | 0.778 |
DDX21 | DDX1 | ENSOARP00000005698 | ENSOARP00000017583 | Uncharacterized protein. | DEAD-box helicase 1. | 0.811 |
DDX21 | DDX41 | ENSOARP00000005698 | ENSOARP00000005977 | Uncharacterized protein. | DEAD-box helicase 41. | 0.460 |
DDX21 | DHX36 | ENSOARP00000005698 | ENSOARP00000003754 | Uncharacterized protein. | DEAH-box helicase 36. | 0.907 |
DDX21 | DHX9 | ENSOARP00000005698 | ENSOARP00000020502 | Uncharacterized protein. | DExH-box helicase 9. | 0.830 |
DDX41 | DDX1 | ENSOARP00000005977 | ENSOARP00000017583 | DEAD-box helicase 41. | DEAD-box helicase 1. | 0.408 |
DDX41 | DDX21 | ENSOARP00000005977 | ENSOARP00000005698 | DEAD-box helicase 41. | Uncharacterized protein. | 0.460 |
DDX41 | DHX36 | ENSOARP00000005977 | ENSOARP00000003754 | DEAD-box helicase 41. | DEAH-box helicase 36. | 0.805 |
DDX41 | DHX9 | ENSOARP00000005977 | ENSOARP00000020502 | DEAD-box helicase 41. | DExH-box helicase 9. | 0.768 |
DDX41 | LRRFIP1 | ENSOARP00000005977 | ENSOARP00000020421 | DEAD-box helicase 41. | LRR binding FLII interacting protein 1. | 0.710 |
DDX41 | MYD88 | ENSOARP00000005977 | ENSOARP00000001070 | DEAD-box helicase 41. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Increases IL-8 transcription. Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes (By similarity). MyD88-mediated signaling in intestinal epithelial cells is cruc [...] | 0.419 |
DHX36 | C1orf74 | ENSOARP00000003754 | ENSOARP00000004603 | DEAH-box helicase 36. | Chromosome 1 open reading frame 74. | 0.740 |
DHX36 | DDX1 | ENSOARP00000003754 | ENSOARP00000017583 | DEAH-box helicase 36. | DEAD-box helicase 1. | 0.979 |
DHX36 | DDX21 | ENSOARP00000003754 | ENSOARP00000005698 | DEAH-box helicase 36. | Uncharacterized protein. | 0.907 |
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