STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUNDC1FUN14 domain containing 1. (155 aa)    
Predicted Functional Partners:
PGAM5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
     
 0.996
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.991
SRC
Tyrosine-protein kinase.
    
 0.984
GABARAP
GABA type A receptor-associated protein.
   
 0.977
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.963
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.959
MAP1LC3B
Uncharacterized protein.
    
 0.954
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
   
 
 0.946
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.946
CSNK2A1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.946
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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