STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5P0U1_SHEEPTruB_N domain-containing protein. (252 aa)    
Predicted Functional Partners:
GAR1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.917
NOP10
NOP10 ribonucleoprotein.
   
 0.917
NOP56
NOP56 ribonucleoprotein.
   
 
 0.884
NOP58
NOP58 ribonucleoprotein.
  
 
 0.881
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 0.861
FBL
Fibrillarin.
   
 
 0.769
FBLL1
Fibrillarin like 1.
   
 
 0.769
NHP2
NHP2 ribonucleoprotein.
  
 0.758
PUS1
PseudoU_synth_1 domain-containing protein.
   
 0.756
WRAP53
WD repeat containing antisense to TP53.
    
 0.756
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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