STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis associated 6. (488 aa)    
Predicted Functional Partners:
SUN5
Sad1 and UNC84 domain containing 5.
      
 0.789
SPATA18
Spermatogenesis associated 18.
      
 0.787
GMCL1
BTB domain-containing protein.
      
 0.756
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.747
CLHC1
Clathrin heavy chain linker domain containing 1.
      
 0.722
LUZP2
Uncharacterized protein.
      
 0.722
ANKRD55
Ankyrin repeat domain 55.
      
 0.720
PRND
Prion-like protein doppel; Required for normal acrosome reaction and for normal male fertility (By similarity). Can bind Cu(2+) (By similarity). Belongs to the prion family.
      
 0.706
ZDHHC19
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.699
SPATA46
Spermatogenesis associated 46.
      
 0.690
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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