STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABEP1Rabaptin, RAB GTPase binding effector protein 1. (863 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
   
 0.997
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 0.937
RAB5A
Uncharacterized protein.
    
 0.922
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.916
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 0.878
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 0.807
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.770
ANKRD27
Ankyrin repeat domain 27.
   
 0.749
RAB5B
RAB5B, member RAS oncogene family.
    
 0.742
RAB5C
Uncharacterized protein.
    
 0.742
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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