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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBN1Ubinuclein 1. (1172 aa)    
Predicted Functional Partners:
ASF1A
ASF1 anti-silencing function 1-like protein A.
    
 0.997
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.994
W5PTN9_SHEEP
Uncharacterized protein.
   
 0.993
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.829
H3F3A
Histone H3.3.
    
 
 0.683
DAXX
Death domain associated protein.
      
 0.662
ATRX
ATRX chromatin remodeler.
   
 
 0.632
ZMYM3
Zinc finger MYM-type containing 3.
   
  
 0.585
POPDC2
Popeye domain containing 2.
      
 0.580
TLK2
Tousled like kinase 2.
   
 
 0.537
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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