STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIRTPhosphoinositide interacting regulator of transient receptor potential channels. (137 aa)    
Predicted Functional Partners:
STARD10
Uncharacterized protein.
      
 0.673
W5P8J8_SHEEP
START domain-containing protein.
      
 0.673
W5Q9U8_SHEEP
Synapsin_C domain-containing protein.
      
 0.673
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.619
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.617
SYN1
Synapsin I.
      
 0.616
W5QAZ4_SHEEP
Uncharacterized protein.
      
 0.602
GOLGA1
Golgin A1.
      
 0.589
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.584
PHF24
PHD finger protein 24.
      
 0.536
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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