STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH1G-patch domain containing 1. (930 aa)    
Predicted Functional Partners:
MRM1
Mitochondrial rRNA methyltransferase 1.
   
  
 0.869
CCDC12
Coiled-coil domain containing 12.
    
 0.861
MPHOSPH6
Uncharacterized protein.
      
 0.852
WDR83
WD repeat domain 83.
    
 
 0.845
LOC101119379
Uncharacterized protein.
    
  0.835
YJU2
YJU2 splicing factor homolog.
    
  0.828
SRRM1
Serine and arginine repetitive matrix 1.
     
 0.796
PLRG1
Pleiotropic regulator 1.
    
 
 0.795
MTREX
Mtr4 exosome RNA helicase.
   
 0.765
CDC40
Cell division cycle 40.
    
  0.759
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.