STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAT1Vesicle amine transport 1. (311 aa)    
Predicted Functional Partners:
CHCHD3
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
  
 0.541
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.539
KPNB1
Karyopherin subunit beta 1.
      
 0.526
ADHFE1
Fe-ADH domain-containing protein.
     
 0.495
UBLCP1
Ubiquitin like domain containing CTD phosphatase 1.
    
 
 0.489
FASN
Uncharacterized protein.
  
 0.485
W5Q6U0_SHEEP
Carrier domain-containing protein.
  
0.485
NT5C3A
5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.
      
 0.480
TCN1
Transcobalamin 1.
      
 0.476
W5P3R0_SHEEP
Thioredoxin domain-containing protein.
      
 0.473
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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