STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB27BRAB27B, member RAS oncogene family. (218 aa)    
Predicted Functional Partners:
SYTL4
Synaptotagmin like 4.
   
 
 0.894
RAB27A
RAB27A, member RAS oncogene family.
  
  
0.876
CD63
Tetraspanin.
     
 0.870
SYTL2
Synaptotagmin like 2.
   
 
 0.782
SYTL5
Synaptotagmin like 5.
   
 
 0.763
DENND5A
DENN domain containing 5A.
      
 0.725
DENND5B
DENN domain containing 5B.
      
 0.665
RPH3A
Rabphilin 3A.
    
 
 0.658
CD81
Tetraspanin.
     
 0.642
W5P7F8_SHEEP
Tetraspanin.
     
 0.642
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.