STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2AF1L4Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.965
W5PEQ9_SHEEP
Uncharacterized protein.
   
 0.742
LOC105605421
RRM domain-containing protein.
   
 0.725
W5QBE3_SHEEP
RRM domain-containing protein.
   
 0.725
ENSOARP00000020040
annotation not available
   
 0.725
SF1
Splicing factor 1.
 
 
 0.682
MAGOHB
Mago homolog B, exon junction complex subunit.
   
 
 0.675
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 
 0.642
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.637
THOC1
THO complex 1.
     
 0.634
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.