STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACRGLParkin coregulated like. (253 aa)    
Predicted Functional Partners:
W5PTX8_SHEEP
WD_REPEATS_REGION domain-containing protein.
    
 
 0.828
WDR90
Uncharacterized protein.
    
 
 0.828
TEFM
Transcription elongation factor, mitochondrial.
      
 0.823
SHKBP1
SH3KBP1 binding protein 1.
      
 0.801
AFG1L
AFG1 like ATPase.
      
 0.777
XYLB
Xylulokinase.
   
  
 0.734
EFHB
EF-hand domain family member B.
   
   0.721
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.708
MEIG1
Meiosis/spermiogenesis associated 1.
    
 
 0.659
FAM184B
Family with sequence similarity 184 member B.
    
 
 0.650
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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