STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATN1Atrophin 1. (1168 aa)    
Predicted Functional Partners:
RERE
Uncharacterized protein.
 
 
 
 0.932
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.890
TGM6
Transglutaminase 6.
      
 0.864
ATXN1
Ataxin 1.
      
 0.741
ATXN2
Ataxin 2.
   
  
 0.739
ATXN3
Josephin domain-containing protein.
      
 0.734
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
   
  
 0.684
NRL
Neural retina leucine zipper.
      
 0.681
ATXN10
Ataxin 10.
      
 0.667
AR
Androgen receptor.
    
 0.657
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.