STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB23RAB23, member RAS oncogene family. (237 aa)    
Predicted Functional Partners:
ARL3
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.773
INTU
Inturned planar cell polarity protein.
    
 
 0.695
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.690
GLI3
GLI family zinc finger 3.
      
 0.688
GLI2
GLI family zinc finger 2.
      
 0.667
TCTN3
Tectonic family member 3.
      
 0.642
TCTN1
Tectonic family member 1.
      
 0.633
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
     
 0.631
ARHGEF4
Rho guanine nucleotide exchange factor 4.
      
 0.627
ARL2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
      
 0.605
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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