STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJA1Praja ring finger ubiquitin ligase 1. (628 aa)    
Predicted Functional Partners:
GINM1
Glycoprotein integral membrane 1.
    
 
 0.833
CXorf38
Chromosome X open reading frame 38.
      
 0.829
PAQR5
Progestin and adipoQ receptor family member 5.
    
 
 0.828
S100A5
Protein S100; Belongs to the S-100 family.
      
 0.786
S100A14
S100 calcium binding protein A14; Belongs to the S-100 family.
      
 0.786
JRKL
JRK like.
      
 0.784
LCTL
Lactase like; Belongs to the glycosyl hydrolase 1 family.
      
 0.781
RNF11
Ring finger protein 11.
   
    0.780
UBE2G1
Ubiquitin conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.773
MAGED1
MAGE family member D1.
   
 
 0.766
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.