Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCA4 | PDE6B | ENSOARP00000018379 | ENSOARP00000018206 | ATP binding cassette subfamily A member 4. | Phosphodiesterase. | 0.490 |
ABCA4 | PRCD | ENSOARP00000018379 | ENSOARP00000007377 | ATP binding cassette subfamily A member 4. | Photoreceptor disc component. | 0.671 |
ABCA4 | RHO | ENSOARP00000018379 | ENSOARP00000015330 | ATP binding cassette subfamily A member 4. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | 0.650 |
ABCA4 | RPGRIP1 | ENSOARP00000018379 | ENSOARP00000021123 | ATP binding cassette subfamily A member 4. | RPGR interacting protein 1. | 0.581 |
ABCA4 | SPATA7 | ENSOARP00000018379 | ENSOARP00000003326 | ATP binding cassette subfamily A member 4. | Spermatogenesis associated 7. | 0.416 |
ABCA4 | TULP1 | ENSOARP00000018379 | ENSOARP00000013041 | ATP binding cassette subfamily A member 4. | Tubby-like protein; Belongs to the TUB family. | 0.446 |
CCDC66 | PRCD | ENSOARP00000016391 | ENSOARP00000007377 | Coiled-coil domain containing 66. | Photoreceptor disc component. | 0.714 |
CCDC66 | RPGRIP1 | ENSOARP00000016391 | ENSOARP00000021123 | Coiled-coil domain containing 66. | RPGR interacting protein 1. | 0.480 |
CCDC66 | TTC8 | ENSOARP00000016391 | ENSOARP00000003569 | Coiled-coil domain containing 66. | Tetratricopeptide repeat domain 8. | 0.531 |
NECAP1 | PDE6B | ENSOARP00000002650 | ENSOARP00000018206 | NECAP endocytosis associated 1. | Phosphodiesterase. | 0.654 |
NECAP1 | PRCD | ENSOARP00000002650 | ENSOARP00000007377 | NECAP endocytosis associated 1. | Photoreceptor disc component. | 0.829 |
NECAP1 | RHO | ENSOARP00000002650 | ENSOARP00000015330 | NECAP endocytosis associated 1. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | 0.403 |
NECAP1 | RPGRIP1 | ENSOARP00000002650 | ENSOARP00000021123 | NECAP endocytosis associated 1. | RPGR interacting protein 1. | 0.728 |
PDE6B | ABCA4 | ENSOARP00000018206 | ENSOARP00000018379 | Phosphodiesterase. | ATP binding cassette subfamily A member 4. | 0.490 |
PDE6B | NECAP1 | ENSOARP00000018206 | ENSOARP00000002650 | Phosphodiesterase. | NECAP endocytosis associated 1. | 0.654 |
PDE6B | PRCD | ENSOARP00000018206 | ENSOARP00000007377 | Phosphodiesterase. | Photoreceptor disc component. | 0.661 |
PDE6B | RHO | ENSOARP00000018206 | ENSOARP00000015330 | Phosphodiesterase. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | 0.701 |
PDE6B | TTC8 | ENSOARP00000018206 | ENSOARP00000003569 | Phosphodiesterase. | Tetratricopeptide repeat domain 8. | 0.481 |
PRCD | ABCA4 | ENSOARP00000007377 | ENSOARP00000018379 | Photoreceptor disc component. | ATP binding cassette subfamily A member 4. | 0.671 |
PRCD | CCDC66 | ENSOARP00000007377 | ENSOARP00000016391 | Photoreceptor disc component. | Coiled-coil domain containing 66. | 0.714 |
page 1 of 4