Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBFA2T2 | HMGN3 | ENSOARP00000008622 | ENSOARP00000007497 | Uncharacterized protein. | High mobility group nucleosomal binding domain 3. | 0.523 |
CBFA2T2 | IKZF5 | ENSOARP00000008622 | ENSOARP00000009729 | Uncharacterized protein. | IKAROS family zinc finger 5. | 0.666 |
CBFA2T2 | INO80D | ENSOARP00000008622 | ENSOARP00000019855 | Uncharacterized protein. | INO80 complex subunit D. | 0.402 |
DRAP1 | HMGN3 | ENSOARP00000000137 | ENSOARP00000007497 | DR1 associated protein 1. | High mobility group nucleosomal binding domain 3. | 0.532 |
DRAP1 | RUVBL2 | ENSOARP00000000137 | ENSOARP00000013476 | DR1 associated protein 1. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.547 |
ENSOARP00000003040 | HMGN3 | ENSOARP00000003040 | ENSOARP00000007497 | annotation not available | High mobility group nucleosomal binding domain 3. | 0.483 |
HMGN3 | CBFA2T2 | ENSOARP00000007497 | ENSOARP00000008622 | High mobility group nucleosomal binding domain 3. | Uncharacterized protein. | 0.523 |
HMGN3 | DRAP1 | ENSOARP00000007497 | ENSOARP00000000137 | High mobility group nucleosomal binding domain 3. | DR1 associated protein 1. | 0.532 |
HMGN3 | ENSOARP00000003040 | ENSOARP00000007497 | ENSOARP00000003040 | High mobility group nucleosomal binding domain 3. | annotation not available | 0.483 |
HMGN3 | HMGN5 | ENSOARP00000007497 | ENSOARP00000001151 | High mobility group nucleosomal binding domain 3. | High mobility group nucleosome binding domain 5. | 0.536 |
HMGN3 | IKZF5 | ENSOARP00000007497 | ENSOARP00000009729 | High mobility group nucleosomal binding domain 3. | IKAROS family zinc finger 5. | 0.619 |
HMGN3 | INO80D | ENSOARP00000007497 | ENSOARP00000019855 | High mobility group nucleosomal binding domain 3. | INO80 complex subunit D. | 0.530 |
HMGN3 | INO80E | ENSOARP00000007497 | ENSOARP00000004736 | High mobility group nucleosomal binding domain 3. | INO80 complex subunit E. | 0.569 |
HMGN3 | RUVBL2 | ENSOARP00000007497 | ENSOARP00000013476 | High mobility group nucleosomal binding domain 3. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.483 |
HMGN3 | THRB | ENSOARP00000007497 | ENSOARP00000004757 | High mobility group nucleosomal binding domain 3. | Thyroid hormone receptor beta; Nuclear hormone receptor that can act as a repressor or activator of transcription. High affinity receptor for thyroid hormones, including triiodothyronine and thyroxine; Belongs to the nuclear hormone receptor family. NR1 subfamily. | 0.610 |
HMGN3 | W5NXV5_SHEEP | ENSOARP00000007497 | ENSOARP00000003002 | High mobility group nucleosomal binding domain 3. | KRAB-related domain-containing protein. | 0.483 |
HMGN5 | HMGN3 | ENSOARP00000001151 | ENSOARP00000007497 | High mobility group nucleosome binding domain 5. | High mobility group nucleosomal binding domain 3. | 0.536 |
IKZF5 | CBFA2T2 | ENSOARP00000009729 | ENSOARP00000008622 | IKAROS family zinc finger 5. | Uncharacterized protein. | 0.666 |
IKZF5 | HMGN3 | ENSOARP00000009729 | ENSOARP00000007497 | IKAROS family zinc finger 5. | High mobility group nucleosomal binding domain 3. | 0.619 |
INO80D | CBFA2T2 | ENSOARP00000019855 | ENSOARP00000008622 | INO80 complex subunit D. | Uncharacterized protein. | 0.402 |
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