Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARL6IP4 | FBRS | ENSOARP00000007513 | ENSOARP00000007413 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Fibrosin. | 0.538 |
ARL6IP4 | GPC1 | ENSOARP00000007513 | ENSOARP00000019856 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.538 |
ARL6IP4 | LSM6 | ENSOARP00000007513 | ENSOARP00000009125 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Sm domain-containing protein. | 0.483 |
ARL6IP4 | NUDT21 | ENSOARP00000007513 | ENSOARP00000019818 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.520 |
ARL6IP4 | PIP4K2B | ENSOARP00000007513 | ENSOARP00000010554 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. | 0.483 |
ARL6IP4 | RBM39 | ENSOARP00000007513 | ENSOARP00000015942 | ADP ribosylation factor like GTPase 6 interacting protein 4. | RNA binding motif protein 39. | 0.511 |
ARL6IP4 | SUB1 | ENSOARP00000007513 | ENSOARP00000013029 | ADP ribosylation factor like GTPase 6 interacting protein 4. | SUB1 regulator of transcription. | 0.693 |
ARL6IP4 | THRAP3 | ENSOARP00000007513 | ENSOARP00000021127 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Thyroid hormone receptor associated protein 3. | 0.774 |
ARL6IP4 | W5PPU9_SHEEP | ENSOARP00000007513 | ENSOARP00000012476 | ADP ribosylation factor like GTPase 6 interacting protein 4. | Sm domain-containing protein. | 0.483 |
FBRS | ARL6IP4 | ENSOARP00000007413 | ENSOARP00000007513 | Fibrosin. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.538 |
GPC1 | ARL6IP4 | ENSOARP00000019856 | ENSOARP00000007513 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.538 |
GPC1 | THRAP3 | ENSOARP00000019856 | ENSOARP00000021127 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Thyroid hormone receptor associated protein 3. | 0.420 |
LSM6 | ARL6IP4 | ENSOARP00000009125 | ENSOARP00000007513 | Sm domain-containing protein. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.483 |
NUDT21 | ARL6IP4 | ENSOARP00000019818 | ENSOARP00000007513 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.520 |
PIP4K2B | ARL6IP4 | ENSOARP00000010554 | ENSOARP00000007513 | Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.483 |
RBM39 | ARL6IP4 | ENSOARP00000015942 | ENSOARP00000007513 | RNA binding motif protein 39. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.511 |
SUB1 | ARL6IP4 | ENSOARP00000013029 | ENSOARP00000007513 | SUB1 regulator of transcription. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.693 |
SUB1 | THRAP3 | ENSOARP00000013029 | ENSOARP00000021127 | SUB1 regulator of transcription. | Thyroid hormone receptor associated protein 3. | 0.558 |
THRAP3 | ARL6IP4 | ENSOARP00000021127 | ENSOARP00000007513 | Thyroid hormone receptor associated protein 3. | ADP ribosylation factor like GTPase 6 interacting protein 4. | 0.774 |
THRAP3 | GPC1 | ENSOARP00000021127 | ENSOARP00000019856 | Thyroid hormone receptor associated protein 3. | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.420 |
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