Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATF6 | CANX | ENSOARP00000011178 | ENSOARP00000003393 | Activating transcription factor 6. | Calnexin. | 0.702 |
ATF6 | DNAJB9 | ENSOARP00000011178 | ENSOARP00000003734 | Activating transcription factor 6. | DnaJ heat shock protein family (Hsp40) member B9. | 0.490 |
ATF6 | EDEM1 | ENSOARP00000011178 | ENSOARP00000008328 | Activating transcription factor 6. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.744 |
ATF6 | SEL1L | ENSOARP00000011178 | ENSOARP00000003196 | Activating transcription factor 6. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.702 |
ATF6 | SYVN1 | ENSOARP00000011178 | ENSOARP00000013874 | Activating transcription factor 6. | Synoviolin 1. | 0.456 |
ATF6 | XBP1 | ENSOARP00000011178 | ENSOARP00000003151 | Activating transcription factor 6. | BZIP domain-containing protein. | 0.955 |
CANX | ATF6 | ENSOARP00000003393 | ENSOARP00000011178 | Calnexin. | Activating transcription factor 6. | 0.702 |
CANX | DERL1 | ENSOARP00000003393 | ENSOARP00000011741 | Calnexin. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.483 |
CANX | DERL2 | ENSOARP00000003393 | ENSOARP00000003322 | Calnexin. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.591 |
CANX | EDEM1 | ENSOARP00000003393 | ENSOARP00000008328 | Calnexin. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.807 |
CANX | OS9 | ENSOARP00000003393 | ENSOARP00000005994 | Calnexin. | OS9 endoplasmic reticulum lectin. | 0.671 |
CANX | SEL1L | ENSOARP00000003393 | ENSOARP00000003196 | Calnexin. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.611 |
CANX | SYVN1 | ENSOARP00000003393 | ENSOARP00000013874 | Calnexin. | Synoviolin 1. | 0.484 |
CANX | XBP1 | ENSOARP00000003393 | ENSOARP00000003151 | Calnexin. | BZIP domain-containing protein. | 0.675 |
DERL1 | CANX | ENSOARP00000011741 | ENSOARP00000003393 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Calnexin. | 0.483 |
DERL1 | DERL2 | ENSOARP00000011741 | ENSOARP00000003322 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.994 |
DERL1 | DNAJB9 | ENSOARP00000011741 | ENSOARP00000003734 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | DnaJ heat shock protein family (Hsp40) member B9. | 0.423 |
DERL1 | EDEM1 | ENSOARP00000011741 | ENSOARP00000008328 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.723 |
DERL1 | OS9 | ENSOARP00000011741 | ENSOARP00000005994 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | OS9 endoplasmic reticulum lectin. | 0.973 |
DERL1 | SEL1L | ENSOARP00000011741 | ENSOARP00000003196 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.981 |
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