STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome 6 open reading frame 47. (297 aa)    
Predicted Functional Partners:
NCR3
Natural cytotoxicity triggering receptor 3.
      
 0.694
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.613
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.613
LY6G5B
Lymphocyte antigen 6 family member G5B.
      
 0.575
ABHD16A
Abhydrolase domain containing 16A.
      
 0.536
TFAP2D
Transcription factor AP-2 delta.
      
 0.536
ABT1
Activator of basal transcription 1.
      
 0.536
PRRC2A
Proline rich coiled-coil 2A.
      
 0.526
TRIM40
Tripartite motif containing 40.
      
 0.518
CRISP1
Cysteine rich secretory protein 1; Belongs to the CRISP family.
      
 0.476
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.