STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5PKR1_SHEEPRRM domain-containing protein. (200 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
   
 
 0.954
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.847
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.837
W5PEQ9_SHEEP
Uncharacterized protein.
   
 0.836
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.828
SRSF3
Pre-mRNA splicing factor SRP20-like protein.
   
 0.825
W5Q7C1_SHEEP
RRM domain-containing protein.
   
 0.825
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.821
W5NSQ8_SHEEP
Uncharacterized protein.
   
 0.801
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.801
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.