STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1BLysine demethylase 1B. (821 aa)    
Predicted Functional Partners:
ASXL2
ASXL transcriptional regulator 2.
    
 0.915
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.822
W5NUE0_SHEEP
Ubiquitin carboxyl-terminal hydrolase.
   
 0.816
BAP1
Ubiquitin carboxyl-terminal hydrolase.
   
 0.816
MBD5
Methyl-CpG binding domain protein 5.
    
 0.813
RCOR1
REST corepressor 1.
   
 0.789
FOXK1
Forkhead box K1.
    
 0.754
FOXK2
Forkhead box K2.
    
 0.754
RCOR2
REST corepressor 2.
   
 0.721
RCOR3
REST corepressor 3.
   
 0.721
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.