ZDHHC3 protein (Ovis aries) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Ovis aries

NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GABRE	SLC9A3R1	ENSOARP00000009092	ENSOARP00000013120	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.459
GABRE	ZDHHC3	ENSOARP00000009092	ENSOARP00000012175	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.616
HNRNPDL	MPZL1	ENSOARP00000000850	ENSOARP00000013080	Uncharacterized protein.	Myelin protein zero like 1.	0.510
HNRNPDL	MRPS18C	ENSOARP00000000850	ENSOARP00000002942	Uncharacterized protein.	Mitochondrial ribosomal protein S18C.	0.798
HNRNPDL	SRRM1	ENSOARP00000000850	ENSOARP00000006906	Uncharacterized protein.	Serine and arginine repetitive matrix 1.	0.713
HNRNPDL	ZDHHC3	ENSOARP00000000850	ENSOARP00000012175	Uncharacterized protein.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.646
HNRNPDL	ZFYVE19	ENSOARP00000000850	ENSOARP00000021785	Uncharacterized protein.	Zinc finger FYVE-type containing 19.	0.699
MPZL1	HNRNPDL	ENSOARP00000013080	ENSOARP00000000850	Myelin protein zero like 1.	Uncharacterized protein.	0.510
MPZL1	MRPS18C	ENSOARP00000013080	ENSOARP00000002942	Myelin protein zero like 1.	Mitochondrial ribosomal protein S18C.	0.758
MPZL1	SRRM1	ENSOARP00000013080	ENSOARP00000006906	Myelin protein zero like 1.	Serine and arginine repetitive matrix 1.	0.545
MPZL1	ZDHHC3	ENSOARP00000013080	ENSOARP00000012175	Myelin protein zero like 1.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.595
MPZL1	ZFYVE19	ENSOARP00000013080	ENSOARP00000021785	Myelin protein zero like 1.	Zinc finger FYVE-type containing 19.	0.628
MRPS18C	HNRNPDL	ENSOARP00000002942	ENSOARP00000000850	Mitochondrial ribosomal protein S18C.	Uncharacterized protein.	0.798
MRPS18C	MPZL1	ENSOARP00000002942	ENSOARP00000013080	Mitochondrial ribosomal protein S18C.	Myelin protein zero like 1.	0.758
MRPS18C	SRRM1	ENSOARP00000002942	ENSOARP00000006906	Mitochondrial ribosomal protein S18C.	Serine and arginine repetitive matrix 1.	0.750
MRPS18C	ZDHHC3	ENSOARP00000002942	ENSOARP00000012175	Mitochondrial ribosomal protein S18C.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.836
MRPS18C	ZFYVE19	ENSOARP00000002942	ENSOARP00000021785	Mitochondrial ribosomal protein S18C.	Zinc finger FYVE-type containing 19.	0.829
SLC9A3R1	GABRE	ENSOARP00000013120	ENSOARP00000009092	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.459
SLC9A3R1	ZDHHC3	ENSOARP00000013120	ENSOARP00000012175	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.590
SRRM1	HNRNPDL	ENSOARP00000006906	ENSOARP00000000850	Serine and arginine repetitive matrix 1.	Uncharacterized protein.	0.713