STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX15Sorting nexin 15. (323 aa)    
Predicted Functional Partners:
CHMP4B
Charged multivesicular body protein 4B.
   
  
 0.906
USE1
Unconventional SNARE in the ER 1.
    
 0.867
RINT1
RAD50 interactor 1.
   
 0.863
SNX33
Sorting nexin.
   
  
 0.860
STX18
Syntaxin 18.
   
 0.859
SNX2
Sorting nexin 2.
      
 0.850
ZW10
Zw10 kinetochore protein.
    
 0.818
NBAS
Neuroblastoma amplified sequence.
   
 0.811
REEP6
Receptor expression-enhancing protein.
    
   0.746
UBAP1
Ubiquitin associated protein 1.
   
  
 0.736
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.