STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRPNN interacting serine and arginine rich protein. (814 aa)    
Predicted Functional Partners:
PNN
Pinin, desmosome associated protein.
   
 
 0.927
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.923
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.900
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.887
ZFC3H1
Zinc finger C3H1-type containing.
   
    0.882
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.864
TTC14
Tetratricopeptide repeat domain 14.
   
   0.834
NKTR
Natural killer cell triggering receptor.
  
  0.789
SRSF6-2
RRM domain-containing protein.
   
 0.767
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.749
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.