Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CALR | CANX | ENSOARP00000010588 | ENSOARP00000003393 | Calreticulin. | Calnexin. | 0.978 |
CALR | UGGT1 | ENSOARP00000010588 | ENSOARP00000017117 | Calreticulin. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.756 |
CALR | UGGT2 | ENSOARP00000010588 | ENSOARP00000002544 | Calreticulin. | UDP-glucose glycoprotein glucosyltransferase 2. | 0.612 |
CANX | CALR | ENSOARP00000003393 | ENSOARP00000010588 | Calnexin. | Calreticulin. | 0.978 |
CANX | UGGT1 | ENSOARP00000003393 | ENSOARP00000017117 | Calnexin. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.780 |
CANX | UGGT2 | ENSOARP00000003393 | ENSOARP00000002544 | Calnexin. | UDP-glucose glycoprotein glucosyltransferase 2. | 0.752 |
CATSPER3 | OR52W1 | ENSOARP00000015634 | ENSOARP00000018629 | Cation channel sperm associated 3. | Olfactory receptor family 52 subfamily W member 1; Belongs to the G-protein coupled receptor 1 family. | 0.891 |
CATSPER3 | UGGT1 | ENSOARP00000015634 | ENSOARP00000017117 | Cation channel sperm associated 3. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.702 |
KDELR3 | MED13 | ENSOARP00000016536 | ENSOARP00000016072 | ER lumen protein-retaining receptor. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.747 |
KDELR3 | PID1 | ENSOARP00000016536 | ENSOARP00000022130 | ER lumen protein-retaining receptor. | Phosphotyrosine interaction domain containing 1. | 0.717 |
KDELR3 | UGGT1 | ENSOARP00000016536 | ENSOARP00000017117 | ER lumen protein-retaining receptor. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.714 |
KLHL30 | UGGT1 | ENSOARP00000020259 | ENSOARP00000017117 | Kelch like family member 30. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.713 |
MED13 | KDELR3 | ENSOARP00000016072 | ENSOARP00000016536 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | ER lumen protein-retaining receptor. | 0.747 |
MED13 | PID1 | ENSOARP00000016072 | ENSOARP00000022130 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Phosphotyrosine interaction domain containing 1. | 0.767 |
MED13 | UGGT1 | ENSOARP00000016072 | ENSOARP00000017117 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.784 |
OR52W1 | CATSPER3 | ENSOARP00000018629 | ENSOARP00000015634 | Olfactory receptor family 52 subfamily W member 1; Belongs to the G-protein coupled receptor 1 family. | Cation channel sperm associated 3. | 0.891 |
OR52W1 | UGGT1 | ENSOARP00000018629 | ENSOARP00000017117 | Olfactory receptor family 52 subfamily W member 1; Belongs to the G-protein coupled receptor 1 family. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.790 |
PID1 | KDELR3 | ENSOARP00000022130 | ENSOARP00000016536 | Phosphotyrosine interaction domain containing 1. | ER lumen protein-retaining receptor. | 0.717 |
PID1 | MED13 | ENSOARP00000022130 | ENSOARP00000016072 | Phosphotyrosine interaction domain containing 1. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.767 |
PID1 | UGGT1 | ENSOARP00000022130 | ENSOARP00000017117 | Phosphotyrosine interaction domain containing 1. | UDP-glucose glycoprotein glucosyltransferase 1. | 0.753 |
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